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Happy hacking
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Happy hacking

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Starred repositories

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The open source coding agent.

TypeScript 71,680 6,252 Updated Jan 16, 2026

Python script for scanning RNA-binding protein motifs

Python 2 Updated May 6, 2022
Python 107 12 Updated Jan 15, 2026

Research Software Quality Kit - a resource for helping researchers improve the quality of software they write

HTML 48 52 Updated Jan 15, 2026

Collection of modular Cytoscape tutorials for online presentation using reveal.js

HTML 325 117 Updated Nov 6, 2025

A fully functional and simple Machine Learning library made entirely from scratch with Python.

Python 436 27 Updated Dec 28, 2025

Data pipelines to pull / maintain dataset in our new book

Python 6 Updated Apr 11, 2025

Open Source Continuous File Synchronization

Go 79,081 4,885 Updated Jan 15, 2026

The all-in-one Desktop & Docker AI application with built-in RAG, AI agents, No-code agent builder, MCP compatibility, and more.

JavaScript 53,377 5,731 Updated Jan 16, 2026

An LLM-powered knowledge curation system that researches a topic and generates a full-length report with citations.

Python 27,784 2,531 Updated Sep 30, 2025

2D implementation of the board game Khet

C++ 1 Updated Jun 11, 2019

An R-shiny interactive application to explore and valorise gene sets and lists from high throughput genomics experiments.

R 1 Updated Jan 25, 2021

Various perl modules developed at TSL

Perl 2 Updated Mar 25, 2022

A list of deep learning implementations in biology

2,114 491 Updated Jan 2, 2026

SwarmZero's SDK for building AI agents, swarms of agents and much more.

Python 263 49 Updated Aug 6, 2025

Application to assign secondary structure to proteins

C++ 236 29 Updated Nov 27, 2025

psp (Python Scaffolding Projects)

Rust 47 1 Updated Jan 15, 2026
Python 3 Updated Sep 12, 2024
Python 1 Updated Sep 12, 2024
Python 1 Updated Sep 13, 2024
Python 1 Updated Sep 28, 2024

Reproduce a liter version of the algorithm of Clustal

Python 1 Updated Sep 12, 2024

⚛️📈Protein threading implementation using double dynamic programming👥💻

Python 3 Updated Sep 20, 2024

Calcul de la surface accessible au solvant d'une molécule issue d'un fichier PDB

Python 1 Updated Sep 12, 2024
Python 1 Updated Sep 12, 2024

Repliment d'un modèle simplifié de protéine par un algorithme de Monte-Carlo et échange de répliques.

Promela 5 Updated Sep 12, 2024

Compute Accessible Surface Area of a protein to a solvant, based on Shrake-Rupley algorithm and the golden ratio spirale

Python 1 Updated Jan 27, 2025
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