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GDI, OpenGL and Direct3D 9 re-implementation of the DirectDraw API for classic 2D games for better compatibility with Windows ME, 2000, XP, Vista, 7, 8, 10, 11, Wine (Linux/macOS/Android) and Virtu…

C 3,024 200 Updated Jul 3, 2025

BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

218 10 Updated Aug 13, 2025

Tools for analyzing DNA methylation data

C++ 44 11 Updated Jan 11, 2026

The transferase system for retrieving methylome data from methbase

C++ 3 Updated Jan 10, 2026

Official inference framework for 1-bit LLMs

Python 25,681 2,068 Updated Jun 3, 2025

A modern curriculum vitae class for LaTeX

TeX 1,900 595 Updated Jun 13, 2024

cBioPortal for Cancer Genomics

Java 923 788 Updated Jan 9, 2026

Code support all the analyses and figures for the MetaPRISM paper.

Python 8 1 Updated Feb 5, 2024

An R package for model selection in kmeans based on effective degrees of freedom.

C++ 1 1 Updated Jul 8, 2020

Prediction of protein levels from RNA

Jupyter Notebook 6 4 Updated Mar 19, 2024

eCTD package for pilot1 submission to FDA

XSLT 89 22 Updated Mar 14, 2024

Covmuller is an R-package designed for analysis of SARS-CoV-2 sequencing metadata deposited on GISAID

R 4 Updated Apr 17, 2024

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Nextflow 1,179 832 Updated Jan 7, 2026

Implementation of corrplot using ggplot2

R 42 11 Updated May 7, 2022

Fast reading of delimited files

C++ 637 65 Updated Jan 13, 2026

The Julia Programming Language

Julia 48,213 5,705 Updated Jan 13, 2026

📼👾🕹Vaporwave themes and color palettes for ggplot2💾👨‍🎤📺

R 295 15 Updated Mar 5, 2024

ggplot2 themes and palettes based on your favorite TV shows

R 141 8 Updated Feb 27, 2024

R package for modeling single cell UMI expression data using regularized negative binomial regression

R 245 36 Updated Jan 10, 2026
R 8 Updated Sep 2, 2022

A phylogenetic analysis from scRNA-seq data using both expression levels and identified SNVs

R 8 1 Updated Jun 8, 2022

Evolutionary frequency visualization tool of temporal data

R 23 2 Updated Jan 25, 2022

HMMRATAC peak caller for ATAC-seq data

Java 99 22 Updated Nov 12, 2024

Comprehensive language-agnostic guidelines on variables naming. Home of the A/HC/LC pattern.

14,194 922 Updated Mar 13, 2024

Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.

C++ 20 5 Updated Jan 6, 2026
Jupyter Notebook 3 Updated Mar 13, 2022

The interactive graphing library for Python ✨

Python 18,178 2,773 Updated Jan 9, 2026

✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com

HTML 5,754 17,335 Updated Mar 23, 2025
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