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Fast method for inferring cancer clonal population structure from SNV data.
Assignment of known mutational signatures to individual samples and individual somatic mutations
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
🐍 Geometric Computer Vision Library for Spatial AI
A collection of loss functions for medical image segmentation
SOTA medical image segmentation methods based on various challenges
Collection of awesome medical dataset resources.
A playbook for systematically maximizing the performance of deep learning models.
Tool for robust segmentation of >100 important anatomical structures in CT and MR images
医学影像数据集列表 『An Index for Medical Imaging Datasets』
A package for processing signals recorded using wearable sensors, such as Electrocardiogram (ECG), Photoplethysmogram (PPG), Electrodermal activity (EDA) and 3-axis acceleration (ACC).
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
Cleanlab's open-source library is the standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.
Convert JSON annotations into YOLO format.
Dataset Management Framework, a Python library and a CLI tool to build, analyze and manage Computer Vision datasets.
Label Studio is a multi-type data labeling and annotation tool with standardized output format
Annotates variants in MAF with OncoKB annotation.
A program help you find seed.
Command-line program to download videos from YouTube.com and other video sites
sjPlot - Data Visualization for Statistics in Social Science