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qsirecon Public
Forked from PennLINC/qsireconReconstruction of preprocessed q-space images (dMRI)
Python BSD 3-Clause "New" or "Revised" License UpdatedNov 21, 2025 -
qsiprep Public
Forked from PennLINC/qsiprepPreprocessing and reconstruction of diffusion MRI
Python BSD 3-Clause "New" or "Revised" License UpdatedApr 17, 2025 -
heudiconv Public
Forked from akhanf/heudiconvFlexible DICOM conversion into structured directory layouts
Python Other UpdatedFeb 16, 2025 -
mriqc Public
Forked from nipreps/mriqcAutomated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
Python Apache License 2.0 UpdatedMar 20, 2024 -
DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical imag…
Python Other UpdatedApr 10, 2023 -
brkraw Public
Forked from BrkRaw/brkrawBrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data
Python GNU General Public License v3.0 UpdatedMar 30, 2023 -
neurodocker Public
Forked from ReproNim/neurodockerGenerate custom Docker images and minimize existing containers
Python Apache License 2.0 UpdatedMar 29, 2023 -
micapipe Public
Forked from MICA-MNI/micapipemicapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
Shell GNU General Public License v3.0 UpdatedMar 6, 2023 -
TeamCoders_Event_Based_Model Public
Forked from HealthBioscienceIDEAS/TeamCoders_Event_Based_ModelThe notebooks and course content for the upcoming Team Coders event.
Jupyter Notebook UpdatedOct 28, 2022 -
mrtrix3 Public
Forked from MRtrix3/mrtrix3MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and appar…
C++ Mozilla Public License 2.0 UpdatedOct 27, 2021 -
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MRtrix3_connectome Public
Forked from bids-apps/MRtrix3_connectomeGenerate subject connectomes from raw image data and perform inter-subject connection density normalisation, using tools provided in the MRtrix3 software package.
Python Apache License 2.0 UpdatedOct 1, 2019 -
dabestr Public
Forked from ACCLAB/dabestrData Analysis with Bootstrap Estimation in R
R Other UpdatedJul 3, 2019 -
xcpEngine Public
Forked from PennLINC/xcpEngineOfficial public repository for the XCP Engine
Shell MIT License UpdatedMay 2, 2019 -
dataMeta Public
Forked from dmrodz/dataMetaAn R package to create and append a data dictionary for an R dataset
R UpdatedNov 20, 2018 -
scanlab Public
Forked from zavaro/scanlabSoftware for use at the University of Arizona SCAN Lab
Shell GNU General Public License v3.0 UpdatedMay 11, 2018 -
singularity-ants Public
Forked from MPIB/singularity-antsSingularity recipes for singularity images containing ANTs (Advanced Normalization Tools).
UpdatedMar 7, 2018 -
CCOD Public
Comprehensive Concussion Outcomes Database
Creative Commons Attribution Share Alike 4.0 International UpdatedJan 17, 2018 -
zotero-report-customizer Public
Forked from retorquere/zotero-report-customizerCoffeeScript UpdatedDec 29, 2017 -
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dose_meta Public
Forked from keithlohse/dose_metaMeta-analysis of dose and timing of stroke rehabilitation based on the SCOAR database
R UpdatedApr 20, 2016 -
SCOAR Public
Forked from keithlohse/SCOARCreative Commons Attribution Share Alike 4.0 International UpdatedApr 17, 2016
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