Code Repository for the paper "Mechanistic Neural Networks for Scientific Machine Learning", ICML 2024

A list of scRNA-seq analysis tools

Fast and memory-efficient exact attention

Leetcode for Pytorch

Arc Virtual Cell Atlas

An electrocardiogram analysis foundation model.

Code to emulate a gameboy printer via the gameboy link cable, modified to have output that is easy to process on a pico for my use with my printer project

My blog?

3d Files for a Gameboy Macro body

A simple terminal tetris 🕹️

Playing Pokemon Red with Reinforcement Learning

Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace

Live-seq

✨ Awesome - A curated list of amazing Topic Models (implementations, libraries, and resources)

Analysis of patch-seq data in pancreatic islets (ND, T2D and T1D)

Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard

Evaluation of Cell Type Annotation R Packages on Single Cell RNA-seq Data

Implements supervised topic models with a categorical response.

Long Long Term Memory Neural Net Cells

The benchmarking of spatial transcriptomics deconvolution methods

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Scaling Single Cell Analysis to Millions of Cells

Functions to Learn Bayesian Inference

Paper collection for single cell foundation models

Create Blogs and Websites with R Markdown

Use RMarkdown to generate PDF Conference Posters via HTML

SNV calling from single cell sequencing