Lists (12)
de novo assembly
trio assembly, haplotypes resolvedGraph Genomes
✨ Inspiration
Lectures
Teaching moments and lectures, guides…LiftOver annotations
Everything about the Liftaover problem, all types of resources/reposLinux 🐧
Long-read Error Correction
Typically Nanopore Simplex long-read Error CorrectionMacOS
Mac apps et alStars
Automated Apple Music Lossless Sample Rate Switching for Audio Devices on Macs.
Foreign Contamination Screening caller scripts and documentation
Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).
The command line interface for access to the Data Delivery System primarily developed by the SciLifeLab Data Centre.
Ultra-fast preprocessing and quality control for long-read sequencing data
A cloud-based system for the delivery of data from SciLifeLab Facilities to their users (e.g. research group).
Convert RepeatMasker ".out" file into a gff3 with colors!!!
CrowdSec - the open-source and participative security solution offering crowdsourced protection against malicious IPs and access to the most advanced real-world CTI.
A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.
A Nextflow workflow to generate lift over files for any pair of genomes
Repository including scripts and workflows for "Size and composition of haplotype reference panels impact the accuracy of imputation from low-pass sequencing in cattle"
The official information page for the Bovine Pangenome Consortium and its members.
Using zabbix-agent to monitor OpenWRT host with all connected network devices.
RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.
Remotely manage your OpenWrt router. Monitor clients, interfaces, and status.
Official home of genome aligner based upon notion of Cactus graphs
Bos taurus DeepVariant SV calling on illumina PE
An automation tool that connects to Kivra (a Swedish digital mailbox service) to download and organize your digital receipts and letters, helping you maintain a local backup of your important docum…
Intervene: a tool for intersection and visualization of multiple genomic region and gene sets
A list of interesting genome browser and genome visualization programs
Unlock your displays on your Mac! Flexible HiDPI scaling, XDR/HDR extra brightness, virtual screens, DDC control, extra dimming, PIP/streaming, EDID override and lots more!