-
cubic Public
CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)
-
NanoPyx Public
Forked from HenriquesLab/NanoPyxNanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
Jupyter Notebook Creative Commons Attribution 4.0 International UpdatedNov 26, 2025 -
cp_measure Public
Forked from afermg/cp_measureIsolating CellProfiler Measurements from the frontend codebase
Python MIT License UpdatedNov 24, 2025 -
VisCy Public
Forked from mehta-lab/VisCycomputer vision models for single-cell phenotyping
-
copairs Public
Forked from cytomining/copairsFind pairs and compute metrics between them.
-
-
2024_Kalinin_mAP Public
Forked from carpenter-singh-lab/2025_Kalinin_mAPPython BSD 3-Clause "New" or "Revised" License UpdatedSep 8, 2025 -
CellProfiler Public
Forked from CellProfiler/CellProfilerAn open-source application for biological image analysis
Python Other UpdatedJul 25, 2025 -
-
-
3d-cell-morphometry Public
Forked from SOCR/3d-cell-morphometrySource code and workflow protocols for SOCR 3D Cell Morphometry Project
Jupyter Notebook Other UpdatedJun 13, 2025 -
grit-benchmark Public
Forked from broadinstitute/grit-benchmarkBenchmarking a metric used to evaluate a perturbation strength
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJun 9, 2025 -
-
cytominer-eval Public
Forked from cytomining/cytominer-evalCommon Evaluation Metrics for DataFrames
-
pycytominer Public
Forked from cytomining/pycytominercytominer python package
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 10, 2025 -
Mitocheck-MAP-analysis Public
Forked from WayScience/Mitocheck-MAP-analysisUtilizing the mean average precision (MAP) metric to assess reproducibility and perturbation effect on single-cell profiles in the MitoCheck dataset.
Jupyter Notebook Creative Commons Zero v1.0 Universal UpdatedOct 3, 2024 -
pytorch_fnet Public
Forked from AllenCellModeling/pytorch_fnetThree dimensional cross-modal image inference
-
position-effect-correction Public
Forked from broadinstitute/position-effect-correctionHTML BSD 3-Clause "New" or "Revised" License UpdatedAug 30, 2024 -
datasets Public
Forked from jump-cellpainting/datasetsImages and other data from the JUMP Cell Painting Consortium
-
Fluorescence-Reconstruction Public
Forked from CohenLabPrinceton/Fluorescence-ReconstructionPython UpdatedMar 13, 2024 -
MeshNet Public
Forked from iMoonLab/MeshNetMeshNet: Mesh Neural Network for 3D Shape Representation (AAAI 2019)
Python MIT License UpdatedMar 6, 2024 -
voxel2mesh Public
Forked from cvlab-epfl/voxel2meshVoxel2Mesh: 3D Mesh Model Generation from Volumetric Data
-
personal.github.io Public template
Forked from leonidk/leonidk.github.ioa fork of https://jonbarron.info/ for use in jekyll builds with markdown page updates
SCSS MIT License UpdatedAug 29, 2023 -
pytorch-3dunet Public
Forked from wolny/pytorch-3dunet3D U-Net model for volumetric semantic segmentation written in pytorch
Jupyter Notebook MIT License UpdatedJul 10, 2023 -
imagen-pytorch Public
Forked from lucidrains/imagen-pytorchImplementation of Imagen, Google's Text-to-Image Neural Network, in Pytorch
Python MIT License UpdatedJul 7, 2023 -
NDC Public
Forked from czq142857/NDCPyTorch implementation of Neural Dual Contouring.
Python MIT License UpdatedJul 6, 2023 -
-
cytodata.github.io Public
Forked from cytodata/cytodata.github.ioCytoData Society website
HTML MIT License UpdatedJun 10, 2023 -
SegLoss Public
Forked from JunMa11/SegLossOdysseyA collection of loss functions for medical image segmentation
Python Apache License 2.0 UpdatedApr 18, 2023 -
{{ message }}