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Green Theory Studio's Symbiota

PHP 5 1 Updated Jan 4, 2026

The Symbiota Virtual Flora/Fauna project develops on-line tools to aid the generation, exploration and management of biodiversity data (collection specimens, observations, images, checklists, keys,…

JavaScript 50 59 Updated Jan 9, 2026

CV/resume generator for academics and engineers, YAML to PDF

Python 14,484 965 Updated Jan 5, 2026

PhyloNetworks: a julia package with utilities for phylogenetic networks

Julia 170 50 Updated Dec 10, 2025

Method to estimate phylogenetic networks from algebraic invariants

HTML 7 2 Updated Oct 3, 2024

A Julia package for constructing large phylogenetic networks efficiently.

Julia 3 Updated Dec 23, 2025

NCBI C++ Toolkit package sources

C++ 84 38 Updated Jan 8, 2026

📚Bioinformatics Technology Lab common code library

C++ 28 6 Updated Dec 17, 2025

GCLib - Genomic C++ library of reusable code for bioinformatics projects

C++ 38 14 Updated Jul 12, 2025

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

C++ 446 87 Updated Dec 16, 2025

A Rust-based library for phylogenetic analysis and manipulation

Rust 16 5 Updated Nov 2, 2025

Make phylogenetic trees and lineages from the NCBI Taxonomy database

Rust 14 Updated Mar 19, 2023

Efficient calculation of phylogenetic distance matrices.

Rust 49 3 Updated Oct 8, 2024

Up to 100x faster strings for C, C++, CUDA, Python, Rust, Swift, JS, & Go, leveraging NEON, AVX2, AVX-512, SVE, GPGPU, & SWAR to accelerate search, hashing, sorting, edit distances, sketches, and m…

C 3,313 117 Updated Dec 26, 2025

alignment to variation graph inducer

C++ 156 20 Updated Dec 10, 2025

Command line scientific data management tool

Rust 230 9 Updated Nov 4, 2024

Read and write common biology file formats

Rust 3 1 Updated Jan 2, 2026

A set of command line utilities based on Rust-Bio.

Rust 205 20 Updated Jun 24, 2024

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

Rust 1,768 214 Updated Nov 3, 2025

🦀 Small exercises to get you used to reading and writing Rust code!

Rust 61,367 11,083 Updated Dec 22, 2025

C++ implementation of several algorithms used in bioinformatics. Might use other languages.

C++ 3 Updated Jun 9, 2024

Interface to the Global Biodiversity Information Facility API

R 172 52 Updated Dec 18, 2025

Servo aims to empower developers with a lightweight, high-performance alternative for embedding web technologies in applications.

Rust 34,921 3,433 Updated Jan 9, 2026

Fullstack app framework for web, desktop, and mobile.

Rust 33,033 1,437 Updated Jan 8, 2026

Exploratory analysis of Bayesian models with Python

Python 1,771 466 Updated Jan 8, 2026

A list of Open Source projects offering jobs.

TypeScript 2,741 195 Updated Dec 12, 2025

Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.

Nextflow 102 21 Updated Nov 20, 2025

Static Code Analysis for R

R 1,270 195 Updated Jan 8, 2026

GBIF API

Java 35 7 Updated Jan 5, 2026
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