reticulate-free single cell format conversion

Shiny app for exploring a PCA

Python package to interactively annotate histological images within a jupyter notebook

Highly parallel LBP implementation

A versatile Nextflow pipeline for unsupervised image segmentation

A python library to develop genomic data simulators

[MIRROR] Official Gentoo ebuild repository

Easily migrate your GitHub contributions!

WireJump is a Linux-based cloud router solution, which uses WireGuard under the hood.

A unifying framework for biomedical research knowledge graphs

Fast Local Binary Patterns using TensorFlow

Codes and results from ONT dRNA benchmarking

Stay Focused. Take a Break.

Code for Dharia NV, et al. A First-Generation Pediatric Cancer Dependency Map. Nature Genetics 2021.

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Cross-platform modern c++ GUI

Tutorials for the SCOG Virtual Workshop ‘Spatial transcriptomics data analysis in Python’ - May 23-24, 2022

scSNV Mapping tool for 10X Single Cell Data

Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.

Color blindness friendly visualization of single-cell and bulk RNA-sequencing data

Scrapping tool for GISAID data regarding SARS-CoV-2

An R package for experimental psychologists