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Message Passing Neural Networks for Molecule Property Prediction

Python 2,209 709 Updated Nov 11, 2025

Language models for drug discovery using torchrl

Python 113 16 Updated Sep 16, 2025

List of molecules (small molecules, RNA, peptide, protein, enzymes, antibody, and PPIs) conformations and molecular dynamics (force fields) using generative artificial intelligence and deep learning

265 23 Updated Dec 25, 2025

[ICLR 2024] EquiformerV2: Improved Equivariant Transformer for Scaling to Higher-Degree Representations

Python 314 43 Updated Feb 11, 2025

Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

Python 126 19 Updated Jan 8, 2023

Protein 3D structure prediction pipeline

HTML 92 60 Updated Dec 19, 2025

Structural Quality Assessment for Biomolecular Structure Prediction Models

Python 65 5 Updated Dec 26, 2025

The #100DaysOfMLCode is a challenge that encourages beginners to code and study machine learning for at least an hour, every day for 100 days.

Jupyter Notebook 21 5 Updated Mar 18, 2022

TheBoringNotch: Not so boring notch That Rocks 🎸🎶

Swift 6,123 428 Updated Dec 19, 2025

Bioconductor teaching and education committee

HTML 53 26 Updated Dec 22, 2025

Practical Cheminformatics Tutorials

Jupyter Notebook 1,148 205 Updated Dec 14, 2025

A computational drug discovery project, in which bioinformatic and machine learning tools are used to identify possible molecular targets and drug chemical features to treat prostate cancer

Jupyter Notebook 23 5 Updated Feb 12, 2021

ML algorithms implemented and derived from first-principles in Jupyter Notebooks and NumPy

TeX 972 66 Updated Sep 7, 2025

Continuous Thought Machines, because thought takes time and reasoning is a process.

Python 1,668 255 Updated Dec 20, 2025
Python 4,480 475 Updated Jul 25, 2024

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

Python 3,915 759 Updated Feb 7, 2024

Master programming by recreating your favorite technologies from scratch.

Markdown 452,183 42,419 Updated Dec 26, 2025

Implementations of different GNNs from scratch for chemists

Jupyter Notebook 159 30 Updated Dec 16, 2025