AxonDeepSeg
Segmentation software for microscopy data of nerve fibers based on deep learning.
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Showing 10 of 32 repositories
- ASTIH Public
Axon Segmentation Training Initiative for Histology: A collection of datasets for axon and myelin segmentation in microscopy images.
axondeepseg/ASTIH’s past year of commit activity - model_seg_unmyelinated_tem Public
Model for unmyelinated axon segmentation in TEM images, based on nnUNet
axondeepseg/model_seg_unmyelinated_tem’s past year of commit activity - model-seg-human-brain-cars Public
Axon and myelin segmentation model in histology images to quantify myelination in the human brain. Training data was acquired in the uncinate fasciculus using CARS microscopy.
axondeepseg/model-seg-human-brain-cars’s past year of commit activity - model_seg_killifish Public
Myelinated & Unmyelinated Axon Segmentation in Teleost Killifish TEM Images
axondeepseg/model_seg_killifish’s past year of commit activity - data_axondeepseg_srf_testing Public
Testing set of https://dandiarchive.org/dandiset/001350/0.250511.1527
axondeepseg/data_axondeepseg_srf_testing’s past year of commit activity - data_axondeepseg_sem Public
SEM dataset for AxonDeepSeg. Example dataset containing scanning electron microscopy (SEM) data to illustrate BIDS convention.
axondeepseg/data_axondeepseg_sem’s past year of commit activity - data_ci Public
axondeepseg/data_ci’s past year of commit activity
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