Lists (32)
Analysis
4 repositories
Applications
5 repositories
CellBiology
Cell biology tools2 repositories
Classes
5 repositories
data-analysis-module
Packages that are used to process data e.g statistical learning models5 repositories
data-processing-tools
Tools that are used for processing data1 repository
data-repos
repositories of data1 repository
Datascience/ML/AI
Data science and Artificial intelligence stack5 repositories
datasets
data set repository1 repository
Debugging
Tools useful for debugging code2 repositories
HIddenGems
2 repositories
image-based-profiling
Tools that are used in the field of image-based profiling8 repositories
Langauges
Programing Languages5 repositories
linters
Code linters1 repository
mk-docs-plugins
Plugins for mkdocs1 repository
neovim-plugins
neovim tings2 repositories
omics-analysis
Analysis tools for omics datasets12 repositories
PersonalProjects
Small Personal Projectsplotting-packages
Contains list of software that is meant for visualizing data.7 repositories
pre-commit-tools
list of tools that can be used in pre-commits7 repositories
Project Templates
Contains templates on how to create project repos1 repository
Projects
3 repositories
protein-analysis
13 repositories
Rust-Gui
1 repository
Sources
Information. tutorials, resources12 repositories
Terminal-plugins
1 repository
Tools
33 repositories
Tutorials
2 repositories
WebsiteTemplates
Contains all websites templates6 repositories
work
Anything work related with image-based profiles2 repositories
workflows
workflows and workflow plugins1 repository
Working Projects
1 repository
Starred repositories
A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.
A Collection of Variational Autoencoders (VAE) in PyTorch.
Public development project of the LAMMPS MD software package
An in-memory data analysis format for single-cell profiles alongside their corresponding images and segmentation masks.
Unbearably fast near-real-time pure-Python runtime-static type-checker.
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Morphological features from images and masks made easy.
⚡ A Fast, Extensible Progress Bar for Python and CLI
Workflow for single-cell RNA-seq analysis using Seurat
Publication-ready NN-architecture schematics.
Methods for detecting doublets in single-cell sequencing data
R package to infer biological activities from omics data using a collection of methods.
scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images
add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.
automatically add annotations to untyped python code!
The interactive graphing library for Python ✨
An implementation of the Grammar of Graphics in R