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Nextflow workflow for extracting (human) single sample from a larger exome sequencing multisample/cohort VCF and annote and prioritize exome variants of that sample
Nextflow UpdatedSep 29, 2022 -
gatk4-germline-snps-indels-1 Public
Forked from seqeralabs/gatk4-germline-snps-indelsWorkflow for germline short variant discovery using GATK4
Nextflow UpdatedDec 16, 2021 -
IODS-project Public
Forked from KimmoVehkalahti/IODS-projectTemplate for the IODS course
HTML UpdatedDec 13, 2021 -
varanto Public
Varanto is an online database and tool for annotating human genetic variations using various annotation data sources.
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gatk4-exome-analysis-pipeline Public
Forked from gatk-workflows/gatk4-exome-analysis-pipelineThis WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and Indel discovery in human exome sequencing data.
WDL BSD 3-Clause "New" or "Revised" License UpdatedMar 17, 2020 -
gatk4-germline-snps-indels Public
Forked from gatk-workflows/gatk4-germline-snps-indelsWorkflows for germline short variant discovery with GATK4
WDL BSD 3-Clause "New" or "Revised" License UpdatedMar 6, 2020 -
Bringing-the-Power-of-Synthetic-Data-Generation-to-the-Masses Public
Forked from NCBI-Hackathons/Bringing-the-Power-of-Synthetic-Data-Generation-to-the-MassesWe aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testing analysis methods as well as training and collaboration
Jupyter Notebook MIT License UpdatedMay 17, 2019 -
wdlRunR Public
Forked from seandavi/wdlRunRElastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
R UpdatedApr 26, 2019
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