The Cursor & Windsurf community, find rules and MCPs

The Composer of ggplots

A Transcriptomics-Proteomics Integration Pipeline

Practical R Packaging with Docker

Turn your data frame into a tableau style drag and drop UI interface to build visualization in R.

A collection of useful functions for bioinformatics data analysis

A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner

A simpler site generator. Transforms a directory of templates (of varying types) into HTML.

R package to create a ggplot-based Sankey graphic that encodes flows with a color gradient.

Prototype Shiny apps in Excalidraw

Interpretation of cell states using reference single-cell maps

A set of beautifully-designed, accessible components and a code distribution platform. Works with your favorite frameworks. Open Source. Open Code.

Download FASTQ files from SRA or ENA repositories.

Gene regulatory network containing signed transcription factor-target gene interactions

A list of scRNA-seq analysis tools

Tool for plotting sequencing data along genomic coordinates.

Per-base per-nucleotide depth analysis

A tutorial for the Great Expectations library.

Error correction of second-generation sequencing technologies.

Tools to gather evidence for structural variation via breakpoint detection.

Very little code to make PyTorch Lightning models

📺 Discover the latest machine learning / AI courses on YouTube.

Example artifacts used by an example company.

Enhancing {ggplot2} plots with statistical analysis 📊📣

Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.

Quickly build Explainable AI dashboards that show the inner workings of so-called "blackbox" machine learning models.

Accelerating ggplot2

Filters and Shaders for 'ggplot2'