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Add multiqc for metaphlan #600

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Merged
sofstam merged 6 commits into from
Apr 24, 2025
Merged

Add multiqc for metaphlan #600

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ffb7306
Add multiqc for metaphlan
sofstam Apr 17, 2025
b10ec50
Update config
sofstam Apr 17, 2025
2d5d173
Fix link in nanoq
sofstam Apr 24, 2025
197864d
Add metaphlan output in docs
sofstam Apr 24, 2025
bf47578
Update changelog
sofstam Apr 24, 2025
da8a27a
[automated] Fix code linting
nf-core-bot Apr 24, 2025
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Add metaphlan output in docs
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@sofstam
sofstam committed Apr 24, 2025
commit 197864d8ef87c6c8dabbd3a211640ba3940eebe3
1 change: 1 addition & 0 deletions docs/output.md
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Expand Up @@ -713,6 +713,7 @@ You can expect in the MultiQC reports either sections and/or general stats colum
- diamond
- malt
- motus
- metaphlan

:::info
The 'General Stats' table by default will only show statistics referring to pre-processing steps, and will not display possible values from each classifier/profiler, unless turned on by the user within the 'Configure Columns' menu or via a custom MultiQC config file (`--multiqc_config`).
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