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Adding shortread deduplication feature with fastp #439

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Merged
jfy133 merged 14 commits into from
Feb 1, 2024
Merged

Adding shortread deduplication feature with fastp #439

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4add6c9
Merge pull request #388 from nf-core/dev
LilyAnderssonLee Oct 11, 2023
baede5b
Merge pull request #399 from nf-core/dev
jfy133 Oct 11, 2023
3d4eda2
Merge pull request #411 from nf-core/dev
jfy133 Oct 27, 2023
df4e001
Merge pull request #426 from nf-core/dev
jfy133 Jan 12, 2024
21e6af8
Merge pull request #435 from nf-core/dev
sofstam Jan 25, 2024
6c752a9
add fastp dedup
maxibor Jan 25, 2024
837a239
Merge branch 'fastp_dedup' into dev
maxibor Jan 25, 2024
2570c0f
update changelog
maxibor Jan 25, 2024
e6fdf57
Update CHANGELOG.md
maxibor Jan 26, 2024
6867467
Update nextflow_schema.json
maxibor Jan 26, 2024
47edb12
Update nextflow_schema.json
maxibor Jan 26, 2024
1fed057
Merge branch 'dev' into dedup
sofstam Jan 26, 2024
ea35f93
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sofstam Jan 26, 2024
7e3f119
Apply suggestions from code review
jfy133 Feb 1, 2024
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@sofstam
sofstam committed Jan 26, 2024
commit ea35f933ca4b364e57261346f820b619fc9db070
1 change: 0 additions & 1 deletion CHANGELOG.md
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Expand Up @@ -10,7 +10,6 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#439](https://github.com/nf-core/taxprofiler/pull/439) Read deduplication with fastp (added by @maxibor)
- [#440](https://github.com/nf-core/taxprofiler/pull/440) Include pre-built kaiju databases in tutorial.md (added by @Joon-Klaps)


### `Fixed`

### `Dependencies`
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