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Configbuilder: nf-core configs create #3949

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e93b45a
Add basic skeleton with welcome screen
jfy133 May 25, 2024
266a163
Update changelgo
jfy133 May 25, 2024
71a1475
Fix linting failure
jfy133 May 25, 2024
a583018
Linting
jfy133 May 25, 2024
5e1dc52
Move common util functions/classes to common location
jfy133 May 26, 2024
03eaa52
Move textual CSS to common place
jfy133 May 26, 2024
b82b6fb
Add config type question
jfy133 May 26, 2024
5f6b2a4
Start adding basic details screen. Missing: validation. Not working: …
jfy133 May 26, 2024
e8233f5
Merge branch 'dev' into configbuilder2
jfy133 Jun 1, 2024
17971e6
Fix function calling due to move to generic location
jfy133 Jun 1, 2024
15f5be8
Copy over @mirpedrol 's writing functions
jfy133 Jun 1, 2024
4af6e99
Start making config writing function actually write nextflow configs
jfy133 Jun 2, 2024
2d7863a
Add URL saving, start adding validation: problem unless everything fi…
jfy133 Jun 8, 2024
edc2d8f
Merge branch 'dev' into configbuilder2
jfy133 Jun 30, 2024
e01c486
Merge branch 'dev' into configbuilder2
jfy133 Jun 30, 2024
f0cb5e9
Small debugging, now know the issue
jfy133 Jun 30, 2024
66227b7
Fixing writing of parameters to the input file when no input from user
jfy133 Jun 30, 2024
f8ad151
Merge branch 'dev' of https://github.com/nf-core/tools into configbui…
mirpedrol Mar 31, 2025
46c4c0a
Add back configs create command
mirpedrol Apr 2, 2025
dc22d8f
update to new version of textual and rename CreateConfig classes
mirpedrol Apr 2, 2025
544fd89
add screen asking if the config is nf-core
mirpedrol Apr 2, 2025
33e88dd
add validation of basicdetails
mirpedrol Apr 2, 2025
227abc2
conditional validation for nf-core configs
mirpedrol Apr 2, 2025
954b263
Merge branch 'dev' into configbuilder2
mirpedrol May 5, 2025
48ce7a5
remove config author and url from pipeline configs
mirpedrol May 5, 2025
078520a
fix custom fields using hide class and add pipeline name or path
mirpedrol May 5, 2025
a55d26b
add screen to select if config is for an HPC or not
mirpedrol May 5, 2025
b143b30
Merge branch 'dev' of https://github.com/mirpedrol/tools into configb…
mirpedrol Sep 5, 2025
b0ad759
use 'local' for no HPC
mirpedrol Sep 5, 2025
d557970
add HPC configuration screen
mirpedrol Sep 5, 2025
580598b
add screen for final infrastructure config details - containers cache…
mirpedrol Sep 5, 2025
45aa6fb
Merge branch 'dev' into configbuilder2
mirpedrol Dec 1, 2025
908d9fb
Merge pull request #3001 from jfy133/configbuilder2
mirpedrol Dec 1, 2025
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use 'local' for no HPC
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@mirpedrol
mirpedrol committed Sep 5, 2025
commit b0ad75992ad50148deb5604c480f3e4607d512e4
10 changes: 5 additions & 5 deletions nf_core/configs/create/hpcquestion.py
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Original file line number Diff line number Diff line change
Expand Up @@ -12,10 +12,10 @@

You want to create a config file for an HPC.
"""
markdown_type_pc = """
## Choose _"PC"_ if:
markdown_type_local = """
## Choose _"local"_ if:

You want to create a config file to run your pipeline on a personal computer.
You want to create a config file to run your pipeline on a local computer.
"""

markdown_details = """
Expand Down Expand Up @@ -43,8 +43,8 @@ def compose(self) -> ComposeResult:
Center(Button("HPC", id="type_hpc", variant="success")),
),
Center(
Markdown(markdown_type_pc),
Center(Button("PC", id="type_pc", variant="primary")),
Markdown(markdown_type_local),
Center(Button("local", id="type_local", variant="primary")),
),
classes="col-2 pipeline-type-grid",
)
Expand Down