Skip to content

TEMPLATE: fix nf-test scope to ignore nf-core module/swf tests #3609

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
mashehu merged 5 commits into from
Jun 9, 2025
Merged

TEMPLATE: fix nf-test scope to ignore nf-core module/swf tests #3609

Changes from 1 commit
Commits
Show all changes
5 commits
Select commit Hold shift + click to select a range
e41aa7e
fix nf-test scope, to ignore nf-core module/swf tests
mashehu Jun 9, 2025
50b8c76
[automated] Update CHANGELOG.md
nf-core-bot Jun 9, 2025
e6dc4a9
set asyncio mode and fix asyncio deprecation warning
mashehu Jun 9, 2025
a7b73a1
update test
mashehu Jun 9, 2025
b25f728
Merge branch 'fix-nf-test-scope' of github.com:mashehu/tools into fix…
mashehu Jun 9, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Next Next commit
fix nf-test scope, to ignore nf-core module/swf tests
  • Loading branch information
@mashehu
mashehu committed Jun 9, 2025
commit e41aa7ed62d5492560e49e63e35524967921b0b5
2 changes: 1 addition & 1 deletion nf_core/pipeline-template/nf-test.config
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ config {
configFile "tests/nextflow.config"

// ignore tests coming from the nf-core/modules repo
ignore 'modules/nf-core/**/*', 'subworkflows/nf-core/**/*'
ignore 'modules/nf-core/**/tests/*', 'subworkflows/nf-core/**/tests/*'

// run all test with defined profile(s) from the main nextflow.config
profile "test"
Expand Down
Loading