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Merged
nf-core-bot merged 15 commits into from
Apr 30, 2025
Merged

Dev #3557

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aff6853
template: downgrade nf-schema to fix CI tests
mashehu Apr 24, 2025
1a2b643
[automated] Update CHANGELOG.md
nf-core-bot Apr 24, 2025
49280ef
run awsfulltest after release, and with dev revision on PRs to master
mirpedrol Mar 7, 2025
15cf1f4
fix jinja template
mirpedrol Mar 7, 2025
c761c0e
update linting of actions_awsfulltest
mirpedrol Mar 7, 2025
660d734
remove not available branches on pull_request_review
mirpedrol Mar 12, 2025
87c1324
remove checking number of approvals
mirpedrol Mar 12, 2025
aac57cb
adding jinja template raw
mirpedrol Mar 12, 2025
4093d36
fix nf-test-tests branch
mirpedrol Apr 25, 2025
4c91928
bump version to 3.2.1
mashehu Apr 29, 2025
32a8d21
bump version to 3.2.1
mashehu Apr 29, 2025
511126a
fail ci.yml gracefully on latest-everything
mashehu Apr 29, 2025
31b4d43
Merge branch 'patch-3.2.1' of github.com:mirpedrol/tools into patch-3…
mashehu Apr 29, 2025
e6497bc
Merge pull request #3546 from mirpedrol/patch-3.2.1
mirpedrol Apr 30, 2025
ba43b1f
Merge branch 'main' of https://github.com/nf-core/tools into dev
mirpedrol Apr 30, 2025
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fix jinja template
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@mirpedrol
mirpedrol committed Apr 25, 2025
commit 15cf1f48f69db97ca17b5abd41f817caf256d926
4 changes: 2 additions & 2 deletions nf_core/pipeline-template/.github/workflows/awsfulltest.yml
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Expand Up @@ -40,7 +40,7 @@ jobs:
id: test_variables
if: github.event_name != 'workflow_dispatch'
run: |
JSON_RESPONSE='${{ steps.check_approvals.outputs.data }}'{% endraw %}
JSON_RESPONSE='${{ steps.check_approvals.outputs.data }}'
CURRENT_APPROVALS_COUNT=$(echo $JSON_RESPONSE | jq -c '[.[] | select(.state | contains("APPROVED")) ] | length')
test $CURRENT_APPROVALS_COUNT -ge 2 || exit 1 # At least 2 approvals are required

Expand All @@ -53,7 +53,7 @@ jobs:
uses: seqeralabs/action-tower-launch@v2
# TODO nf-core: You can customise AWS full pipeline tests as required
# Add full size test data (but still relatively small datasets for few samples)
# on the `test_full.config` test runs with only one set of parameters {%- raw %}
# on the `test_full.config` test runs with only one set of parameters
with:
workspace_id: ${{ secrets.TOWER_WORKSPACE_ID }}
access_token: ${{ secrets.TOWER_ACCESS_TOKEN }}
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