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Add nf-core template version badges to README #3396

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Merged
mirpedrol merged 14 commits into from
Feb 13, 2025
Merged

Add nf-core template version badges to README #3396

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bf11fd2
Add template version badge to template REEADME
jfy133 Jan 14, 2025
e8c5997
Update nextflow badge too
jfy133 Jan 14, 2025
eb6d6c5
Update CHANGELOG.md
jfy133 Jan 14, 2025
6586cc3
[automated] Update CHANGELOG.md
nf-core-bot Jan 14, 2025
191d211
Merge branch 'dev' into version-badges
jfy133 Jan 21, 2025
e411c65
Merge branch 'dev' into version-badges
mirpedrol Feb 12, 2025
ad5a922
update nextflow badge link for linting
mirpedrol Feb 12, 2025
ac43b00
update nf-core template version with template updates and lint for nf…
mirpedrol Feb 12, 2025
216481f
update regex to match dev versions
mirpedrol Feb 12, 2025
e93f6d4
fix bump-version of nextflow
mirpedrol Feb 12, 2025
b9179f8
update test_bump_nextflow_version test
mirpedrol Feb 12, 2025
ddb1987
skip nfcore_template_badge linting on customised templates
mirpedrol Feb 12, 2025
229c95b
Apply suggestions from code review
mirpedrol Feb 13, 2025
08e0d7e
update linting regex
mirpedrol Feb 13, 2025
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update regex to match dev versions
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@mirpedrol
mirpedrol committed Feb 12, 2025
commit 216481fb39ec4226f841bc8b6e0a40d0eacf3ea6
2 changes: 1 addition & 1 deletion nf_core/pipelines/lint/readme.py
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Expand Up @@ -77,7 +77,7 @@ def readme(self):
if "nfcore_template_badge" not in ignore_configs:
# Check that there is a readme badge showing the current nf-core/tools template version
# [![nf-core template version](https://img.shields.io/badge/nf--core_template-3.2.0-green?style=flat&logo=nfcore&logoColor=white&color=%2324B064&link=https%3A%2F%2Fnf-co.re)](https://nf-co.re)
t_badge_re = r"\[!\[nf-core template version\]\(https://img\.shields\.io/badge/nf--core_template-([\d\.]+)-green\?style=flat&logo=nfcore&logoColor=white&color=%2324B064&link=https%3A%2F%2Fnf-co\.re\)\]\(https://nf-co\.re\)"
t_badge_re = r"\[!\[nf-core template version\]\(https://img\.shields\.io/badge/nf--core_template-([\d\.]+(\.dev[\d\.])?)-green\?style=flat&logo=nfcore&logoColor=white&color=%2324B064&link=https%3A%2F%2Fnf-co\.re\)\]\(https://nf-co\.re\)"
match = re.search(t_badge_re, content)
if match:
passed.append("README nf-core template version badge found.")
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