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update components to fix CI testing #2949

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Merged
merged 5 commits into from
May 3, 2024
Merged

update components to fix CI testing #2949

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80fcd09
update components to fix CI testing
mashehu May 3, 2024
13b1f10
[automated] Update CHANGELOG.md
nf-core-bot May 3, 2024
c234c15
Merge branch 'dev' into update-components
mashehu May 3, 2024
32ac383
[automated] Update CHANGELOG.md
nf-core-bot May 3, 2024
0adbe37
fix changelog
mashehu May 3, 2024
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Original file line number Diff line number Diff line change
Expand Up @@ -14,6 +14,7 @@
- Remove `pyproject.toml` from template root
- Shorten lines in pipeline template ([#2908](https://github.com/nf-core/tools/pull/2908))
- Permanently activated pipeline-specific institutional configs support for all pipelines without need for manual intervention ([#2936](https://github.com/nf-core/tools/pull/2936))
- Update included components ([#2949](https://github.com/nf-core/tools/pull/2949))

### Linting

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4 changes: 2 additions & 2 deletions nf_core/pipeline-template/modules.json
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Expand Up @@ -7,7 +7,7 @@
"nf-core": {
"fastqc": {
"branch": "master",
"git_sha": "f4ae1d942bd50c5c0b9bd2de1393ce38315ba57c",
"git_sha": "285a50500f9e02578d90b3ce6382ea3c30216acd",
"installed_by": ["modules"]
},
"multiqc": {
Expand All @@ -26,7 +26,7 @@
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"git_sha": "92de218a329bfc9a9033116eb5f65fd270e72ba3",
"installed_by": ["subworkflows"]
},
"utils_nfvalidation_plugin": {
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6 changes: 6 additions & 0 deletions nf_core/pipeline-template/modules/nf-core/fastqc/main.nf
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8 changes: 7 additions & 1 deletion nf_core/pipeline-template/subworkflows/nf-core/utils_nfcore_pipeline/main.nf
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