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Sync improvement addressing #787

automation

Status: Merged (completed).

nf-core/toolsnumber 821

#821 In nf-core/tools;

· by KevinMenden was closed on Feb 17, 2021

Add module test-yml generation tool

command line toolsAnything to do with the cli interfacesAnything to do with the cli interfaces

Status: Merged (completed).

nf-core/toolsnumber 833

#833 In nf-core/tools;

· by KevinMenden was closed on Mar 11, 2021

Adding <code>nf-core modules lint</code> command

linting

Status: Merged (completed).

nf-core/toolsnumber 842

#842 In nf-core/tools;

· by KevinMenden was closed on Mar 17, 2021

Move commands into base image instead of Dockerfile in template

Status: Merged (completed).

nf-core/toolsnumber 854

#854 In nf-core/tools;

· by ewels was closed on Feb 17, 2021

Added groovy functions in lib to reduce boilerplate code

Status: Merged (completed).

nf-core/toolsnumber 857

#857 In nf-core/tools;

· by KevinMenden was closed on Mar 11, 2021

Add lint test for merge markers

Status: Merged (completed).

nf-core/toolsnumber 861

#861 In nf-core/tools;

· by KevinMenden was closed on Mar 11, 2021

GitHub Actions: check for merge markers

linting

low-priority

Status: Closed (completed).

#321 In nf-core/tools;

· by ewels was closed on Mar 18, 2021

Check params for core nextflow flags

templatenf-core pipeline/component templatenf-core pipeline/component template

Status: Closed (completed).

#604 In nf-core/tools;

· by ewels was closed on Feb 17, 2021

Validate parameters against schema at pipeline runtime

templatenf-core pipeline/component templatenf-core pipeline/component template

Status: Closed (completed).

#426 In nf-core/tools;

· by ewels was closed on Feb 17, 2021

Resolve how lint tests for pinned docker image work

linting

Status: Closed (completed).

#410 In nf-core/tools;

· by ewels was closed on Oct 22, 2020

Automatically build CLI help using JSON Schema

templatenf-core pipeline/component templatenf-core pipeline/component template

Status: Closed (completed).

#577 In nf-core/tools;

· by ewels was closed on Mar 12, 2021

Validate --max_memory and --max_time parameters and exit if not a valid Nextflow resource unit

bugSomething isn't workingSomething isn't working

Status: Closed (completed).

#793 In nf-core/tools;

· by drpatelh was closed on Feb 17, 2021

Output docs HTML file includes GitHub warning

bugSomething isn't workingSomething isn't working

Status: Closed (completed).

#810 In nf-core/tools;

· by ewels was closed on Feb 18, 2021