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Commits on Nov 19, 2025

• Merge pull request #930 from d4straub/add-semibin

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Commits on Nov 18, 2025

• fix rocrate_readme_sync

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• add SemiBin2 to docs

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• adjust test_hybrid checksums for sequencing-type=long_reads

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• skip tests with long reads and too less contigs

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• correct assembly type handling: short or long reads

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• Merge branch 'dev' of https://github.com/nf-core/mag into add-semibin

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• skip semibin2 in profile test_single_end

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• skip semibin2 in profile test_alternatives

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Commits on Nov 17, 2025

• update test_hybrid test snap

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• update default test snap

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• ignore checksum of semibin logs that contain time stamps

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• update test_assembly_input.nf.test.snap

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Commits on Nov 14, 2025

• integrate semibin/singleeasybin

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Commits on Nov 12, 2025

• Merge pull request #927 from d4straub/fix-metabinner-tooshort

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• Fix when there are no too short contigs for MetaBinner

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Commits on Nov 4, 2025

• Merge pull request #881 from d4straub/add-MetaBinner

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• min_contig_size now via process input val instead of task.ext.

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• fix rocrate_readme_sync

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• merge upstream dev

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• clean up unzipped file

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Commits on Nov 3, 2025

• fix rocrate_readme_sync

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• merge upstream dev

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• apply suggestions from code review

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• Apply suggestion from @dialvarezs

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• Apply suggestion from @dialvarezs

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Commits on Oct 28, 2025

• fix rocrate_readme_sync

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• merge upstream dev

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Commits on Oct 27, 2025

• split METABINNER into subworkflow

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Commits on Oct 24, 2025

• fix rocrate_readme_sync

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• merge in dev

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• update CHANGELOG with acknowledgment

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• handle tool version appropriately

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• add param bin_metabinner_scale

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• Update docs/output.md

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