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nf-core / molkart Public

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Added anndata as an output format#49

Merged

FloWuenne merged 11 commits intodevnf-core/molkart:devfrom

anndata_outputnf-core/molkart:anndata_outputCopy head branch name to clipboard

Jan 5, 2024

Conversation Commits11 (11)Checks Files changed

Merged

Added anndata as an output format#49
FloWuenne merged 11 commits intodevfrom
anndata_output

Commits

Commits on Dec 19, 2023

Added first version of formatting spot2cell as anndata.
FloWuenne
committed
Black reformatting.
FloWuenne
committed

Commits on Jan 4, 2024

Merge remote-tracking branch 'origin/dev' into anndata_output
FloWuenne
committed
Added createanndata process after spot2cell.
FloWuenne
committed
Updated molkart-local version to v0.0.3 for all local modules.
FloWuenne
committed
Modified create anndata code to add regionprops to adata.obs.
FloWuenne
committed
Prettier fix.
FloWuenne
committed
Changelog update.
FloWuenne
committed
Added anndata to output.md
FloWuenne
committed
Added anndata to CITATIONS.md
FloWuenne
committed

Commits on Jan 5, 2024

minor_fixes
kbestak
committed

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