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nf-core_website Public
Forked from nf-core/websiteCode and files for the main nf-core website.
MDX MIT License UpdatedNov 19, 2025 -
nf-core_modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedOct 29, 2025 -
STAG-LLM Public
Forked from KavrakiLab/STAG-LLMLarge language models for binding affinity
Python MIT License UpdatedSep 2, 2025 -
ERGO-II Public
Forked from IdoSpringer/ERGO-IIERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction
Python MIT License UpdatedAug 28, 2025 -
airrflow Public
Forked from nf-core/airrflowB-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
Nextflow MIT License UpdatedJun 23, 2025 -
hlatyping Public
Forked from nf-core/hlatypingPrecision HLA typing from next-generation sequencing data
Nextflow MIT License UpdatedApr 14, 2025 -
epitopeprediction Public
Forked from nf-core/epitopepredictionA bioinformatics best-practice analysis pipeline for epitope prediction and annotation
Nextflow MIT License UpdatedApr 7, 2025 -
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MixTCRpred Public
Forked from GfellerLab/MixTCRpredPredictor of TCR-epitope interactions
Python Other UpdatedJan 16, 2025 -
nf-core_proteinfold Public
Forked from nf-core/proteinfoldProtein 3D structure prediction pipeline
Nextflow MIT License UpdatedOct 21, 2024 -
nf-core_test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedSep 23, 2024 -
homogeneous-data-processing Public
Forked from ghga-de/homogeneous-data-processingPython UpdatedMay 13, 2024 -
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedMay 8, 2023 -
backports-datetime-fromisoformat-feedstock Public
Forked from conda-forge/backports-datetime-fromisoformat-feedstockA conda-smithy repository for backports-datetime-fromisoformat.
BSD 3-Clause "New" or "Revised" License UpdatedFeb 23, 2023 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedFeb 23, 2023 -
multi-package-containers Public
Forked from BioContainers/multi-package-containersTesting building mulled containers for multi-requirement tools.
UpdatedJan 17, 2023 -
BiG-MEx Public
Forked from pereiramemo/BiG-MExBiG-MEx implementation as Docker images and R packages
HTML GNU General Public License v3.0 UpdatedFeb 25, 2020
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