A virtual lab of LLM agents for science research

UCSC Genome Browser source. "beta" is released version / "master" is testing.

A simple Snakemake profile for Slurm without --cluster-config

Generate HCR-style Probe Pairs for mRNA visualization

TheBGAcademy 2024: Gene prediction with BRAKER3

a nextflow pipeline for creating a pangenome with minigraph-cactus

Snakemake workflows for performing whole genome alignment with Cactus efficiently on SLURM clusters

Cleanlab's open-source library is the standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.

Graphical tool to make photo collage posters

Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets

Algorithm For Gene Order Reconstruction in Ancestors

Inventory of all the educational content that I share on spatial data analytics, geostatistics and machine learning. I hope these resources are helpful, Prof. Michael Pyrcz

rapid phylogenomic tree calculator - A highly customizable framework for reproducible phylogenomic inference

Nextflow training material for introductory tutorial

A curated list of nextflow based pipelines

Make bilingual epub books Using AI translate

OpenAI + LINE + Vercel = GPT AI Assistant

PhyloAcc a software to detect the changes of conservation of a genomic region

🔬 Path to a free self-taught education in Bioinformatics!

Molecular convergence detection

Collection of bioinformatics training materials

Super Easy installation to make your Raspberry Pi an Audio Receiver

Comparative genomics of obligate brood parasite and closely related species in Anatidae

TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact o…

Scripts and other material for the assembly and analysis of ratite genomes.

💿 Free software that works great, and also happens to be open-source Python.

Convergent substitution detection tool based on the PCOC model