A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.

OMERO Python library for uploading files

Reference deployment of JupyterHub with docker

A structured controlled vocabulary of sample preparation, visualization and imaging methods used in biomedical research.

Loading and handling microscopy data in blender

OMERO.web plugin for the Vitessce multimodal data viewer.

native Python dataclasses for the OME data model

Specification for the ELN File Format

Prototype OMERO.parade implementation using crossfilter.js

3D shape analysis using deep learning

An OMERO CLI plugin for creating transfer packets between OMERO servers.

📋 A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

An evolving guide to learning Deep Learning effectively.

Non-parametric physiological classification of retinal ganglion cells

Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

The NeuroMorph analysis and visualization toolkit