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notebooks for predictive modeling

Jupyter Notebook 1 1 Updated Jun 10, 2023

The Artificial Intelligence for Life in Space (AI4LS) team at NASA Ames uses artificial intelligence and machine learning to support and advance space exploration. This repository contains code forโ€ฆ

Jupyter Notebook 17 6 Updated Oct 27, 2025

CLI for building apps using Cloud Native Buildpacks

Go 2,862 325 Updated Jan 8, 2026

fastq2bcl convert fastq files in a bcl2fastq-able run directory.

Python 12 4 Updated Oct 30, 2023

Hypothesis extension for computational biology

Python 16 2 Updated Jan 23, 2023

Modeling with limited data

Python 60 35 Updated Dec 15, 2025

Nextflow sncRNA identification pipeline for sRNAseq dataset

Jupyter Notebook 1 1 Updated Jan 30, 2024

๐Ÿ•ธ๏ธ Web apps in pure Python ๐Ÿ

Python 27,904 1,674 Updated Jan 7, 2026

Bioinformatics Tools

Python 90 12 Updated Jan 9, 2026

Google Drive Public File Downloader when Curl/Wget Fails

Python 5,038 404 Updated Jan 11, 2026

A specification that python filesystems should adhere to.

Python 1,269 423 Updated Jan 9, 2026

Conditionally run actions based on files modified by PR, feature branch or pushed commits

TypeScript 2,869 349 Updated Nov 25, 2025

Run your GitHub Actions locally ๐Ÿš€

Go 68,046 1,820 Updated Jan 1, 2026

Multiple Imputation with LightGBM in Python

Jupyter Notebook 402 33 Updated Oct 27, 2025

ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.

Python 88 52 Updated Jan 8, 2026
Python 48 12 Updated Jan 9, 2026

Pipeline for processing spatially-resolved gene counts with spatial coordinates and image data. Designed for 10x Genomics Visium transcriptomics.

Nextflow 70 30 Updated Nov 24, 2025

Useful resources for the Test Anything Protocol

639 36 Updated Nov 11, 2025

Opensciency - A core open science curriculum by and for the research community.

TeX 44 17 Updated Jan 24, 2024

Robust representation of semantically constrained graphs, in particular for molecules in chemistry

Python 818 141 Updated May 17, 2025

Agent app that allows connecting remote batch schedulers to Tower Cloud

Java 10 5 Updated Oct 31, 2025

This repository hosts a large collection of Nextflow snippets

56 1 Updated Jan 26, 2025

Radiation metadata curation protocol and tools for the Open Science Data Repository

1 Updated Apr 21, 2023

Script to add preferred ontology accessions to specific fields in ISA-tab structure

1 Updated Apr 24, 2023

The official gpt4free repository | various collection of powerful language models | o4, o3 and deepseek r1, gpt-4.1, gemini 2.5

Python 65,667 13,693 Updated Jan 11, 2026
JavaScript 1 Updated Mar 24, 2023

Testing building mulled containers for multi-requirement tools.

83 232 Updated Jan 8, 2026

Template for building a small workflow in Nextflow

HTML 17 13 Updated May 2, 2022
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