- https://orcid.org/0000-0002-1489-1786
Highlights
- Pro
Stars
Papers with code for single cell related papers
A Cellular Regulatory Network-Aware Transcriptomics Foundation Model
B-cell repertoire and clonal family tree explorer
Color palette package in R inspired by works at the Metropolitan Museum of Art in New York
Comprehensive list of color palettes available in R ❤️🧡💛💚💙💜
apricot implements submodular optimization for the purpose of selecting subsets of massive data sets to train machine learning models quickly. See the documentation page: https://apricot-select.rea…
An R package for detecting and visualizing Kataegis events
Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow
Code to reproduce analyses in Nasser, Bergman, Fulco, Guckelberger, Doughty et al Nature 2021
Scripts to build an **unofficial** Rtools-esq installer for the macOS R toolchain
GNU Fortran (and GCC) compilers for macOS
📓 eLabFTW is the most popular open source electronic lab notebook for research labs.
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
A curated list of research, applications and projects built using the H2O Machine Learning platform
Lightweight converter between hic and cool contact matrices.
🔧 .files, including ~/.macos — sensible hacker defaults for macOS
Command line (bash) scripts to upload large files to AWS glacier using multipart upload and to calculate the required tree hash