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Application to assign secondary structure to proteins

C++ 226 28 Updated Nov 27, 2025

Official Implementation of IgGM

Python 161 31 Updated Nov 26, 2025

Code used to mine surfaces.

Python 24 10 Updated Feb 23, 2025

Code used in paper for G-loop mining.

Jupyter Notebook 18 9 Updated Feb 23, 2025

BindCraft modified to make PyRosetta use and installation optional: no license needed

Python 100 19 Updated Sep 20, 2025

AlphaBind code + model accompanying pre-print

Jupyter Notebook 85 11 Updated Jul 24, 2025

This package contains deep learning models and related scripts for RoseTTAFold

Python 2,211 452 Updated Feb 15, 2024

Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction

Python 13 3 Updated Apr 23, 2024

MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.

Python 705 163 Updated Jun 19, 2024
Python 7 1 Updated Mar 23, 2024

Inference code for RFdiffusion2

Python 339 48 Updated Nov 11, 2025
Python 109 22 Updated Apr 17, 2023

Chai-1, SOTA model for biomolecular structure prediction

Python 1,817 253 Updated Sep 5, 2025

A visual no-code/code-free web crawler/spider易采集:一个可视化浏览器自动化测试/数据采集/爬虫软件,可以无代码图形化的设计和执行爬虫任务。别名:ServiceWrapper面向Web应用的智能化服务封装系统。

JavaScript 43,508 5,339 Updated Oct 30, 2025

Hetionet: an integrative network of disease

HTML 320 72 Updated Apr 3, 2023

ClinicalAgent: Clinical Trial Multi-Agent System with Large Language Model-based Reasoning. BCB '24: Proceedings of the 15th ACM International Conference on Bioinformatics, Computational Biology an…

Jupyter Notebook 24 7 Updated Sep 16, 2025

Biomni: a general-purpose biomedical AI agent

Python 2,359 389 Updated Nov 24, 2025

Robin: A multi-agent system for automating scientific discovery

Python 262 35 Updated Nov 24, 2025
Jupyter Notebook 65 29 Updated Jan 5, 2022

首个中医大语言模型——“仲景”。受古代中医学巨匠张仲景深邃智慧启迪,专为传统中医领域打造的预训练大语言模型。 The first-ever Traditional Chinese Medicine large language model - "CMLM-ZhongJing". Inspired by the profound wisdom of the ancient Chinese me…

Jupyter Notebook 394 29 Updated Aug 6, 2025

关注知乎专栏可以查看已经发布的开发文档:https://zhuanlan.zhihu.com/sandbox 。

Python 416 190 Updated Apr 12, 2019

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies

Python 389 70 Updated Sep 3, 2023

Generative Language Modeling for Antibody Design

Python 173 30 Updated Oct 5, 2024

Sapiens is a human antibody language model based on BERT.

Jupyter Notebook 68 19 Updated May 14, 2025

Antibody-specific masked language model

Python 63 17 Updated Jul 16, 2023

MMseqs2: ultra fast and sensitive search and clustering suite

C 1,900 256 Updated Nov 25, 2025

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology.

Python 722 133 Updated Dec 11, 2022
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