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containers-scilus Public
Forked from scilus/containers-scilusFiles needed to build a container to run all scilus flows.
Dockerfile UpdatedNov 27, 2025 -
nf-neuro Public
Forked from nf-neuro/modulesnf-neuro is a nextflow neuroimaging library maintained by the SCIL team
Nextflow GNU General Public License v3.0 UpdatedNov 26, 2025 -
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clinical-ComBAT Public
Forked from scil-vital/clinical-ComBATRepository dedicated to the clinical-ComBAT harmonisation method
Python Other UpdatedNov 25, 2025 -
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bids2nf Public
Forked from agahkarakuzu/bids2nfEmits nextflow channels from Brain Imaging Data Structure data.
Nextflow MIT License UpdatedOct 8, 2025 -
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scilpy Public
Forked from scilus/scilpyThe Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
Python Other UpdatedOct 1, 2025 -
versaFlow Public
versaFlow is an automated multi-resolution diffusion MRI processing pipeline implemented in Nextflow.
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mrHARDI Public
Multi-usage python library for processing and modeling of diffusion MRI images. For pipelining tools, see mrHARDIflow at https://github.com/AlexVCaron/mrHARDIflow.
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slurm-operator Public
Forked from SlinkyProject/slurm-operatorRun Slurm on Kubernetes. A Slinky project.
Go UpdatedSep 5, 2025 -
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beyond_fa_challenge Public
Forked from scilus/beyond_fa_challengeSCIL team project for the beyond_fa_challenge
Nextflow UpdatedJul 1, 2025 -
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nf-core-tools Public
Forked from nf-core/toolsPython package with helper tools for the nf-core community.
Python MIT License UpdatedApr 16, 2025 -
neurocontainers Public
Forked from neurodesk/neurocontainersThe containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines
Shell MIT License UpdatedMar 25, 2025 -
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website Public
Forked from nf-core/websiteCode and files for the main nf-core website.
MDX MIT License UpdatedFeb 5, 2025 -
mriqc Public
Forked from nipreps/mriqcAutomated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
Python Apache License 2.0 UpdatedFeb 4, 2025 -
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nf-scil Public
Forked from scilus/nf-scilSCIL Nextflow Toolbox
Nextflow GNU General Public License v3.0 UpdatedSep 26, 2024 -
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mrHARDIflow Public
mrHARDI is an automated multi-resolution diffusion MRI processing pipeline implemented in Nextflow.
Nextflow Other UpdatedAug 5, 2024 -
nextflow-website Public
Forked from nextflow-io/websiteNextflow public web site
HTML UpdatedJul 2, 2024
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