Making Protein folding accessible to all via Google Colab!

• AlphaFold2 - predict single domains, w/ MMseqs2 for MSA generation
• RoseTTAFold - predict single domains

Experimental notebooks:

• AlphaFold2_complexes - predict hetero or homodimers
• AlphaFold2_noTemplates_noMD
• AlphaFold2_noTemplates_yesMD

Acknowledgments

• We would like to thank the RoseTTAFold and AlphaFold team for doing an excellent job open sourcing the software.
• Also credit to David Koes for his awesome py3Dmol plugin, without whom these notebooks would be quite boring!
• A colab by Sergey Ovchinnikov (@sokrypton), Milot Mirdita (@milot_mirdita) and Martin Steinegger (@thesteinegger).