1.1 release, documentation update, Makefile update, dlib update.

1.0.3 release. Refactoring, renaming, and expanded SNV calling utilit…

…ies.

Further bug fixes for analysis, esp. depth. -i for rsq. Modified CLIs…

…. Modified tests to correspond.

Zlib compatibility issues, accessory analysis tool fixes.

BMFtools v1.0 release, passing thorough unit tests and large sample-s…

…cale tests, supporting both paired-end and single-end analysis.

Cleaned version for a v0.2.0 release

Merge pull request #26 from ARUP-NGS/dev

Bug fixes for release

dmp, aligntagbam, main and a few other subcommands work.

Inline barcodes work now.