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FingertipMappingMND Public
Code for MND fingertip mapping, whole body localisation, and behavioural experiments
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DICOM2Vid Public
Just a tool to make DICOM folders into videos for participants etc.
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MRSI-Metabolic-Connectome Public
Forked from MRSI-Psychosis-UP/MRSI-Metabolic-ConnectomePython Other UpdatedSep 16, 2025 -
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PACTALS neuroimaging workshop code and slides 2025
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TongueSegMND Public
Exploring tongue segmentation in MND patients. Segmentation, data wrangling, analysis.
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neurodesk.github.io Public
Forked from neurodesk/neurodesk.github.ioHTML Apache License 2.0 UpdatedMay 27, 2025 -
BeLong Public
Scripts for the BeLong study (spine segmentation, brain seg, QSM, DWI, etc)
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BodyLocaliser Public
A Body Localiser experiment for fMRI using psychopy
Python BSD 3-Clause "New" or "Revised" License UpdatedNov 13, 2024 -
neurocontainers Public
Forked from neurodesk/neurocontainersThe containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a container to make them easily available for pipelines
Shell MIT License UpdatedSep 27, 2024 -
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STIMMRI Public
Scripts for STIMMRI project
Shell GNU General Public License v3.0 UpdatedSep 12, 2023 -
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multimodal-connectomes Public
Multimodal connectomes using MICA-PIPE in MND vs HCs
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 25, 2023 -
LASHiS Public
Longitudinal Automatic Segmentation of Hippocampal Subfields (LASHiS) using multi-contrast MRI.
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neurodesktop Public
Forked from neurodesk/neurodesktopThe plug-and-play, browser-accessible, containerised data analysis environment.
Shell MIT License UpdatedDec 9, 2022 -
raw_MR_to_image Public
Forked from bbachrata/raw_MR_to_imageThis code allows reconstruction of raw data acquired with SMURF sequence
MATLAB UpdatedAug 18, 2022 -
sct_tutorial_data Public
Forked from spinalcordtoolbox/sct_tutorial_dataData and scripts for SCT's tutorials and courses
Shell UpdatedApr 20, 2022 -
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ANTs Public
Forked from ANTsX/ANTsAdvanced Normalization Tools (ANTs)
C++ Other UpdatedNov 4, 2021 -
Atlas-GAN Public
Forked from neel-dey/Atlas-GAN[ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates
Python MIT License UpdatedSep 6, 2021 -
PialNet Public
Repo for the 2020 UQ Summer School of AI Hackathon project: "Segmentation of Magnetic Resonance Angiography data"
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MeshProcessing Public
Forked from MahsaShk/MeshProcessingConvert binary map to mesh. The binary map is in nifti format and the mesh is in stl file type.
Python UpdatedMar 9, 2021 -
Deep learning for Segmentation And CharActerisation of Tissue
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This is the code repository for the optimising exercise study for structural MRI data (i.e., pre-processing, longitudinal/cross sectional cortical thickness, hippocampus volumetry using LASHiS and …
Shell UpdatedSep 11, 2020 -
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hackathon2020 Public
Forked from ohbm/hackathon2020Website for the 2020 OHBM Hackathon (Location: 3rd planet from the Sun)
HTML MIT License UpdatedJun 13, 2020 -
container_recipes Public
Container (SIMG,Docker) recipes for a number of projects
Shell UpdatedMar 26, 2020 -
backup_dumu_to_rdm Public
A pretty simple bash file to archive all data on one old filesystem and place it on another
Shell UpdatedFeb 28, 2020
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