EHR
source codes based on PyTorch to analyze EHR
A Deep Learning Python Toolkit for Healthcare Applications.
Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.
DREAM challenge 2021 - To facilitate understanding risk factors that lead to a positive COVID-19 test utilizing electronic health recorded data mapped to the OMOP Common Data Model. UW Medicine cli…
Repository containing Covid Data Save Lives HM Hospitals V3 database creation, dataset data ingestion, data figures calculations and prediction scripts
A suite of plotting notebooks to visualize and validate synthea module output
Source code for StageNet: Stage-Aware Neural Networks for Health Risk Prediction
Source code for JAMIA paper Dr. Agent: Clinical Predictive Model via Mimicked Second Opinions
Source code for AdaCare: Explainable Clinical Health Status Representation Learning via Scale-Adaptive Feature Extraction and Recalibration
ConCare: Personalized Clinical Feature Embedding via Capturing the Healthcare Context (AAAI-2020)
Sequence modeling benchmarks and temporal convolutional networks
Repository for the HiRID ICU Benchmark (HiB) project
A machine learning-based model for survival prediction in COVID patients
Clairvoyance: a Unified, End-to-End AutoML Pipeline for Medical Time Series
Machine Learning and Artificial Intelligence for Medicine.
Source code, knowledge graphs and feature lists for the paper MedML: Fusing Medical Knowledge and Machine Learning Models for Early Pediatric COVID-19 Hospitalization and Severity Prediction
A Comprehensive Benchmark For COVID-19 Predictive Modeling Using Electronic Health Records
The source code for Interpretable ESRD Mortality Prediction with Adaptive Feature Importance Recalibration
Code for TKDE paper: Patient Health Representation Learning via Correlational Sparse Prior of Medical Features.
MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
A worldwide epidemiological database for COVID-19 at fine-grained spatial resolution
Precision Medicine Knowledge Graph (PrimeKG)