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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedDec 2, 2024 -
rnaseq Public
Forked from nf-core/rnaseqRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
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perl-encode-feedstock Public
Forked from conda-forge/perl-encode-feedstockA conda-smithy repository for perl-encode.
Batchfile BSD 3-Clause "New" or "Revised" License UpdatedSep 10, 2024 -
modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedMar 19, 2024 -
salmon Public
Forked from COMBINE-lab/salmon🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
C++ GNU General Public License v3.0 UpdatedMar 15, 2024 -
airrflow Public
Forked from nf-core/airrflowB-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
Nextflow MIT License UpdatedNov 13, 2023 -
viralrecon Public
Forked from nf-core/viralreconAssembly and intrahost/low-frequency variant calling for viral samples
Nextflow MIT License UpdatedOct 6, 2023 -
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spack Public
Forked from spack/spackA flexible package manager that supports multiple versions, configurations, platforms, and compilers.
Python Other UpdatedAug 30, 2023 -
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training Public
Forked from nextflow-io/trainingNextflow training material
Nextflow Other UpdatedFeb 22, 2023 -