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Turso is an in-process SQL database, compatible with SQLite.
Structure prediction and design of proteins with noncanonical amino acids
An open source implementation of LFMs from Liquid AI: Liquid Foundation Models
Public repo for rbio, a biologically-informed reasoning model trained on virtual cell models as verifiers
Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provides a growing set of modules to facilitate the most common t…
Pocket Flow: 100-line LLM framework. Let Agents build Agents!
An upload of markdown files to a hierarchy of Notion pages.
Notion API client SDK, rewritten in Python! (sync + async)
Python SDK, Proxy Server (AI Gateway) to call 100+ LLM APIs in OpenAI (or native) format, with cost tracking, guardrails, loadbalancing and logging. [Bedrock, Azure, OpenAI, VertexAI, Cohere, Anthr…
Lightpanda: the headless browser designed for AI and automation
A fun party trick to run Python code from another venv into this one.
⬛️ CLI tool and library for saving complete web pages as a single HTML file
Visualisations of data are at the core of every publication of scientific research results. They have to be as clear as possible to facilitate the communication of research. As data can have differ…
A reactive notebook for Python — run reproducible experiments, query with SQL, execute as a script, deploy as an app, and version with git. Stored as pure Python. All in a modern, AI-native editor.
Ready-to-use OCR with 80+ supported languages and all popular writing scripts including Latin, Chinese, Arabic, Devanagari, Cyrillic and etc.
Create, manage, and run Jupyter notebooks with their dependencies
Repository for the paper "Optimal design of stochastic DNA synthesis protocols based on generative sequence models" (Weinstein et al., AISTATS, 2022).
Generation of protein sequences and evolutionary alignments via discrete diffusion models
A fast minimalistic implementation of guided generation on Apple Silicon using Outlines and MLX
A matplotlib backend that produces plots using only ASCII characters
GritQL is a query language for searching, linting, and modifying code.
AlphaFold Meets Flow Matching for Generating Protein Ensembles