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Commits on May 11, 2020

• Merge pull request #469 from choderalab/update-neq-test

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Commits on May 4, 2020

• Update neq integrator tests to generate trajectory.

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Commits on Apr 28, 2020

• Merge pull request #467 from choderalab/fix-periodic-nonequilibrium

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Commits on Apr 21, 2020

• Use more robust scheme to initialize PeriodicNonequilibriumIntegrator

  jchodera

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• Ensure alchemical parameters are correctly set at beginning of nonequilibrium periodic integration cycle

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• Fix an issue with accidentally resetting PeriodicNonequilibriumIntegrator

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Commits on Apr 18, 2020

• Merge pull request #466 from choderalab/periodic-nonequilibrium-integrator

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Commits on Apr 17, 2020

• fixing string syntax error and make 'cycle' variable consistent

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Commits on Apr 15, 2020

• Address helpful comments from @dominicrufa

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• Remove unused Jupyter

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• Add back C file

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• Update changelog

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• Add PeriodicNonequilibriumIntegrator (heavily based on loopy integrators from @domrufa)

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• Add PeriodicNonequilibriumIntegrator to docs

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• Remove accidentally committed C vile

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Commits on Apr 14, 2020

• Merge remote-tracking branch 'origin/master' into loopy_alchemical_customintegrator

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• Merge pull request #465 from choderalab/fix-travis-2

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• Fix the fix

  jchodera

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• Fix travis since miniconda changed location

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Commits on Apr 13, 2020

• Merge branch 'loopy_alchemical_customintegrator' of https://github.com/choderalab/openmmtools into loopy_alchemical_customintegrator

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• deleting `x_annealing` as it is a redundant placeholder variable

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• Update openmmtools/integrators.py

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Commits on Apr 10, 2020

• help example

  dominicrufa

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• add a loopy customintegrator

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Commits on Mar 22, 2020

• Merge pull request #462 from choderalab/fix-restrained-indices

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Commits on Mar 21, 2020

• Fix release history

  andrrizzi

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• Fix restrained atom indices

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Commits on Nov 8, 2019

• Merge pull request #451 from choderalab/fix-release

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• Fix release notes

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• Merge pull request #450 from choderalab/fix-release-notes

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• Fix release history

  andrrizzi

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• Better comment

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• Fix SEM in test

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• Merge pull request #407 from choderalab/fix-mpi-mixing

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Commits on Nov 7, 2019

• Merge branch 'master' into fix-mpi-mixing

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