Central code repository for ACLIM. Repo maintained by @kholsman

Code to translate ROMS output to Ecopath physical and biogeochemical forcings

R implementation of the mass balance model Ecopath with Ecosim

Gridded time series analysis

Economic analysis of the project (e.g. landings model and discrete choice model)

Functions to develop environmental indices from Regional Ocean Modelling System models

Recruitment responses to anthropogenic ocean warming

litsearchr is an R package to partially automate search term selection for systematic reviews using keyword co-occurrence networks. In addition to identifying search terms, it can write Boolean sea…

Matlab implementation of the Ecopath food web mass-balance algorithm

A collection of RStudio style cheatsheets for the Stan ecosystem

Bayesian DFA with Stan

Repository for miscellaneous code and data used in FISH 550 (Applied Time Series Analysis) at University of Washington

RStan, the R interface to Stan

Materials for the virtual NIMBLE workshop, May 26-28, 2021. For logistical information, please look below the file listing.

This acts as the landings site for the Jan-Feb 2021 R Workshop for RACE GAP organized by Caitlin Allen Akselrud (@CaitlinAkselrud-NOAA), Emily Markowitz (@EmilyMarkowitz-NOAA), and others. https://…

Lecture notes for EC 607

Curso de formação em ciência aberta, git & Rmarkdown

AD computation with Template Model Builder (TMB)

Render bits of R code for sharing, e.g., on GitHub or StackOverflow.

Fay Labhub site. (Forked from apreshill/labhub - OHSU Open Science Workshop on tools and methods for building transparency within a lab)