Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

Inpactor: Integrated and Parallel Analyzer and Classifier of LTR Retrotransposons for Large Genomes

Phylogenetic Analysis of Long Terminal Repeat Retrotransposons

LTR_retriever accurately identifies and annotates LTR retrotransposons; LAI evaluates the continuity of genome assemblies.

Functional de novo annotation of LTR retrotransposons

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…

Modeling and characterizing dynamic gene regulatory networks underlying cancer drug resistance based on time course RNA-seq data