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chibe - Chisio BioPAX Editor
Updated: Last 30 days - Stars: 6 Chisio BioPAX Editor, or simply ChiBE, is a free editing and visualization tool for pathway models represented by the BioPAX format, using SBGN Process Description Language, based on Chisio. ... Biology, Bioinformatics, BiologicalPathways, BioPAX, SBGN, GraphVisualization, Academic |
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mutation-to-expression - For finding gene mutations that affect downstream expression
Updated: Earlier this year - Stars: 1 This software statistically links genomic mutations of genes to the expression changes at their signaling downstream. Below is a sample influence network linking ESR1 overexpression to mutations of it... Bioinformatics, SystemsBiology, Biology, BiologicalPathways, Genomics, Mutation, GeneExpression |
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mutex - Mutual exclusivity analysis of genomic alterations
Updated: Earlier this year - Stars: 1 This project aims to discover driver alterations in genomic datasets by detecting mutual exclusion (mutex) patterns in alterations of groups of genes with a common downstream effect. Below are example... Bioinformatics, Genomics, Cancer, Algorithm, Analysis, Mutualexclusivity, Mutation, Copynumberalteration, Geneexpression, Biologicalpathways, Signalingpathways |
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pcviz - Network Visualization for Pathway Commons
A web-based network visualization software for the Pathway Commons database. Academic, Bioinformatics, Biology, Networks, BiologicalPathways, ComputationalBiology |