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Commits on Sep 6, 2023

• Update for libxtend API change (standardize on xt_ prefix)

  outpaddling

  committed
  6698aac

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Commits on Mar 16, 2023

• Fix format specifiers for FreeBSD i386

  outpaddling

  committed
  6a71070

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Commits on Apr 24, 2022

• Update for biolibc VCF_API

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  Jason Bacon

  committed
  31b71f7

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Commits on Feb 25, 2022

• Standardize on PREFIX=../local, LOCALBASE=${PREFIX}

  

  Jason Bacon

  committed
  f03e525

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Commits on Feb 8, 2022

• Use -isystem to reduce noise from -MM

  

  Jason Bacon

  committed
  bd89995

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Commits on Feb 1, 2022

• Add cave-man-install.sh

  

  Jason Bacon

  committed
  ce89f53

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Commits on Jan 8, 2022

• Update for biolibc API change

  

  Jason Bacon

  committed
  4c21d89

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Commits on Aug 13, 2021

• Update for new libxtend API

  

  Jason Bacon

  committed
  fa450dd

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Commits on Jul 19, 2021

• Update for biolibc API change

  

  Jason Bacon

  committed
  43d57d7

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Commits on Jul 18, 2021

• Update for biolibc API changes

  

  Jason Bacon

  committed
  b09f893

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Commits on Jul 17, 2021

• Update for biolibc bl_ prefix

  

  Jason Bacon

  committed
  5a2d9d9

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Commits on Jul 16, 2021

• Update for biolibc API change

  

  Jason Bacon

  committed
  405f997

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• Generate new Makefile.depend

  

  Jason Bacon

  committed
  f5dc606

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• Update for biolibc VCF API changes

  

  Jason Bacon

  committed
  05ce9f4

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Commits on Jul 15, 2021

• Update for DSV move from biolibc to libxtend

  

  Jason Bacon

  committed
  bd7ab38

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• Update for changes to biolibc API

  

  Jason Bacon

  committed
  80358e4

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Commits on Jul 14, 2021

• Update for VCF read functions API change

  

  Jason Bacon

  committed
  f3f5277

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Commits on Jul 8, 2021

• Update for biolibc header change

  

  Jason Bacon

  committed
  d95f431

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Commits on Jun 17, 2021

• Makefile: Allow caller to override either MANPREFIX or MANDIR

  

  Jason Bacon

  committed
  bbaae3e

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Commits on Jun 1, 2021

• Update for new biolibc API

  

  Jason Bacon

  committed
  1f5afa4

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Commits on May 19, 2021

• Add -lxtend

  

  Jason Bacon

  committed
  79dba67

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Commits on May 8, 2021

• Clean up depends

  

  Jason Bacon

  committed
  26fd57e

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Commits on May 2, 2021

• Add biostring.h to depends

  

  Jason W Bacon

  authored and

  Jason W Bacon

  committed
  abfc71a

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Commits on Apr 8, 2021

• Regenerate Makefile.depend

  

  Jason Bacon

  committed
  b8c5e33

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• Convert to BIO_READ_OK

  

  Jason Bacon

  committed
  1a88eb1

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Commits on Mar 23, 2021

• Switch to dsvio.h

  

  Jason Bacon

  committed
  2350e59

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Commits on Feb 25, 2021

• Makefile.depend: Add new dsvio.h

  

  Jason Bacon

  committed
  b1f97fd

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Commits on Feb 10, 2021

• Reduce compression to save CPU. No diff in size from -3 to -4.

  

  Jason Bacon

  committed
  dd9d73a

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• Pipe output matrices through xz

  

  Jason Bacon

  committed
  a95b338

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• Use new vcf_call_init() interface to specify max field sizes

  

  Jason Bacon

  committed
  f06787c

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• Mostly working skeletal matrix build loop

  

  Jason Bacon

  committed
  d2654a8

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Commits on Feb 9, 2021

• Initial commit, open all input files and stubbed out matrix build

  

  Jason Bacon

  committed
  db3cff4

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• Initial commit

  outpaddling

  authored
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