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    10 repositories

    • needletail

      Public
      Fast FASTX parsing and k-mer methods in Rust
      Rust
      •
      MIT License
      •28•203•15•1•Updated Dec 15, 2025Dec 15, 2025

    • taxonomy

      Public
      Python and Rust library for loading, saving, and manipulating taxonomic trees
      Rust
      •
      MIT License
      •2•49•8•0•Updated Dec 15, 2025Dec 15, 2025

    • gdl

      Public
      A fast, easy-to-use, command-line tool for downloading genome assemblies from NCBI GenBank (RefSeq).
      Rust
      •
      MIT License
      •1•1•0•0•Updated Jul 22, 2025Jul 22, 2025

    • rust-bfield

      Public
      B-field implementation in Rust
      Rust
      •
      Apache License 2.0
      •4•204•4•0•Updated Jun 24, 2025Jun 24, 2025

    • finch-rs

      Public
      A genomic minhashing implementation in Rust
      Rust
      •
      MIT License
      •8•101•13•2•Updated Jun 17, 2025Jun 17, 2025

    • mmap-bitvec

      Public
      Rust implementation of a mmap-based bit vector
      Rust
      •
      MIT License
      •0•6•4•0•Updated Oct 6, 2023Oct 6, 2023

    • sdust

      Public
      Rust
      •
      MIT License
      •0•0•0•0•Updated May 5, 2022May 5, 2022

    • pyo3-pack

      Public
      Build and publish crates with pyo3, rust-cpython and cffi bindings as well as rust binaries as python packages
      Rust
      •
      Apache License 2.0
      •370•3•0•0•Updated Jun 6, 2019Jun 6, 2019

    • taxonomy-rs

      Public archive
      Load, save, and manipulate taxonomic trees
      Rust
      •
      MIT License
      •2•3•0•0•Updated Apr 30, 2019Apr 30, 2019

    • memmap-rs

      Public
      cross-platform Rust API for memory mapped IO
      Rust
      •
      Apache License 2.0
      •184•0•0•0•Updated Dec 20, 2017Dec 20, 2017