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    83 repositories

    • Blender_Randomiser

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•2•12•0•Updated Dec 23, 2025Dec 23, 2025

    • MILCA

      Public
      Python
      •0•0•0•0•Updated Dec 19, 2025Dec 19, 2025

    • TLOmodel

      Public
      Epidemiology modelling framework for the Thanzi la Onse project
      epidemiologyhealth-economic-evaluationsimulation-modelingindividual-based-modellinghealthcare-systems
      Python
      •
      MIT License
      •16•31•197•54•Updated Dec 31, 2025Dec 31, 2025

    • causalprog

      Public
      A Python package for causal modelling and inference with stochastic causal programming
      Python
      •
      Other
      •0•3•33•4•Updated Dec 22, 2025Dec 22, 2025

    • simstock_qgis

      Public
      Simstock plugin for QGIS: allows dynamic urban building energy models to be created and simulated all within QGIS.
      Python
      •
      Other
      •2•3•20•0•Updated Dec 11, 2025Dec 11, 2025

    • MPHY0026

      Public
      Python
      •
      Other
      •23•25•1•0•Updated Nov 30, 2025Nov 30, 2025

    • ba-ebdp-toolkit

      Public
      Lightweight modelling workflow for EBDP TWIN2EXPAND project
      Python
      •
      GNU Affero General Public License v3.0
      •3•2•0•0•Updated Dec 30, 2025Dec 30, 2025

    • TLOmodel-profiling

      Public
      Profiling outputs for developer use
      Python
      •0•1•2•1•Updated Dec 27, 2025Dec 27, 2025

    • rsd-engineeringcourse

      Public
      Course materials for Research Software Engineering course.
      hacktoberfest
      Python
      •
      Other
      •115•129•49•6•Updated Aug 28, 2025Aug 28, 2025

    • hivpy

      Public
      Python
      •
      MIT License
      •0•0•62•2•Updated Oct 1, 2025Oct 1, 2025

    • metals_extraction

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 13, 2025Jun 13, 2025

    • Methane_oxidation

      Public
      This repository contains code for identification of kinetic models for methane complete oxidation using statistical parameter estimation and model-based design of experiments methods.
      Python
      •
      MIT License
      •0•1•0•0•Updated Jun 5, 2025Jun 5, 2025

    • myriad-stardist-pipeline

      Public
      Pipeline for computing image segmentations using StarDist on Myriad
      Python
      •
      MIT License
      •0•0•2•0•Updated May 30, 2025May 30, 2025

    • COMP0037_24-25

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•7•0•0•Updated Mar 14, 2025Mar 14, 2025

    • simstock

      Public
      Python library for generating EnergyPlus inputs
      Python
      •
      MIT License
      •2•11•5•0•Updated Feb 27, 2025Feb 27, 2025

    • ammir

      Public
      🤖 🏥 End-to-End AI Workflow for Automated Multimodal Medical Image Reporting (AMMIR)
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

    • composite-actions

      Public archive
      Templates for commonly used GitHub actions steps
      Python
      •2•13•0•1•Updated Dec 13, 2024Dec 13, 2024

    • cathpy

      Public
      Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)
      Python
      •
      Other
      •5•15•6•3•Updated Sep 30, 2024Sep 30, 2024

    • dxh

      Public
      Collection of helper functions for working with DOLFINx Python interface
      Python
      •
      MIT License
      •0•3•4•1•Updated Sep 19, 2024Sep 19, 2024

    • interface-uc-unfitted-iso

      Public
      Reproduction material for "Unique continuation for an elliptic interface problem using unfitted isoparametric finite elements" (E. Burman, J. Preuss)
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 16, 2024Aug 16, 2024

    • ba-ebdp-lightweight-template

      Public
      A template workflow for lightweight EBDP workflows
      Python
      •
      GNU Affero General Public License v3.0
      •2•2•0•0•Updated Jul 8, 2024Jul 8, 2024

    • FabNESO

      Public
      Neptune Exploratory Software plug-in for FabSim3
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•2•1•Updated Jul 4, 2024Jul 4, 2024

    • tus-rec-challenge_code

      Public
      Code for Trackerless 3D Freehand Ultrasound Reconstruction Challenge (TUS-REC2024)
      Python
      •1•9•1•0•Updated Jun 23, 2024Jun 23, 2024

    • tus-rec-challenge_baseline

      Public
      This is the official baseline code for TUS-REC Challenge - MICCAI2024
      Python
      •6•0•0•0•Updated Jun 22, 2024Jun 22, 2024

    • calibr

      Public
      Parallelized Bayesian calibration of simulations using Gaussian process emulation
      emulationcalibrationhigh-performance-computingbayesian-inference
      Python
      •
      MIT License
      •0•1•0•0•Updated Apr 26, 2024Apr 26, 2024

    • cid-X

      Public
      Consistent and invertible deformation vector fields for a breathing anthropomorphic phantom: a post-processing framework for the XCAT phantom. Find the documentation on the linked website.
      Python
      •
      Other
      •1•10•3•0•Updated Apr 24, 2024Apr 24, 2024

    • celegans-lifespan

      Public
      Machine learning models to predict lifespan of CElegans from pathology descriptors
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Apr 11, 2024Apr 11, 2024

    • COMP0037_23-24

      Public
      Python
      •3•5•0•0•Updated Mar 8, 2024Mar 8, 2024

    • kaska

      Public
      Python
      •
      Other
      •5•6•18•5•Updated Jan 25, 2024Jan 25, 2024

    • emul

      Public
      Python implementation of Gaussian process emulators
      Python
      •
      MIT License
      •0•1•0•0•Updated Jan 22, 2024Jan 22, 2024