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command line toolsAnything to do with the cli interfacesAnything to do with the cli interfacesgood-first-issue
Description
Description of feature
When writing modules or pipelines, I often have problems remembering the exact URLs/location of test datafiles on the nf-core/test-datasets repository. I normally have to resort to going to GitHub in my browser and navigating to the write directory which takes a lot of time.
It would be cool to have a nf-core subcommand that allows you to 'search' with clever autocomplete prompts for the exact path, and ideally print the line as you would want to copy/paste into your test.
e.g.
nf-core test-dataset search <start typing keywords for autocomplete>
nf-core test-dataset search sarscov2/genome
And spits out:
For use in modules:
file(params.modules_testdata_base_path + 'genomics/sarscov2/genome/genome.fasta', checkIfExists: true)
For use in pipelines:
file(params.pipeline_testdata_base_path + 'genomics/sarscov2/genome/genome.fasta', checkIfExists: true)
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command line toolsAnything to do with the cli interfacesAnything to do with the cli interfacesgood-first-issue