- feat(1929): Make local modules use remote structure ([#3256](https://github.com/nf-core/tools/pull/3256))

- add a panel around diff previews when updating ([#3246](https://github.com/nf-core/tools/pull/3246))

<<<<<<< HEAD

- Add `nf-core subworkflows patch` command ([#2861](https://github.com/nf-core/tools/pull/2861))

- Improve subworkflow nf-test migration warning ([#3298](https://github.com/nf-core/tools/pull/3298))

- Subworkflows created in pipelines "local" dir now use the full template ([#3256](https://github.com/nf-core/tools/pull/3256))

- Update GitHub Actions ([#3237](https://github.com/nf-core/tools/pull/3237))

- add `--dir/-d` option to schema commands ([#3247](https://github.com/nf-core/tools/pull/3247))

<<<<<<< HEAD

- fix headers in api docs ([#3323](https://github.com/nf-core/tools/pull/3323))

- handle new schema structure in `nf-core pipelines create-params-file` ([#3276](https://github.com/nf-core/tools/pull/3276))

- Update Gitpod image to use Miniforge instead of Miniconda([#3274](https://github.com/nf-core/tools/pull/3274))

- Update codecov/codecov-action action to v5 ([#3283](https://github.com/nf-core/tools/pull/3283))

- Update gitpod/workspace-base Docker digest to 12853f7 ([#3309](https://github.com/nf-core/tools/pull/3309))

- Update pre-commit hook astral-sh/ruff-pre-commit to v0.8.2 ([#3325](https://github.com/nf-core/tools/pull/3325))

- Update pre-commit hook astral-sh/ruff-pre-commit to v0.7.1 ([#3250](https://github.com/nf-core/tools/pull/3250))