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traitar module is drafted

Status: Open (in progress).

nf-core/modulesnumber 9605

#9605 In nf-core/modules;

· brovolia opened on Dec 22, 2025

Add module t1k/run

new moduleAdding a new moduleAdding a new module

Status: Open (in progress).

nf-core/modulesnumber 9555

#9555 In nf-core/modules;

· georgiakes opened on Dec 11, 2025

Add draft of FASTQ_REMOVE_ADAPTERS_AND_MERGE subworkflow with tests

Status: Open (in progress).

nf-core/modulesnumber 9521

#9521 In nf-core/modules;

· kornkv opened on Dec 8, 2025

chore(deps): update dependency prettier to v3.7.3

Status: Merged (completed).

nf-core/modulesnumber 9483

#9483 In nf-core/modules;

· by renovate was closed on Dec 1, 2025

plastid metagene_generate, make_wiggle, psite

Status: Merged (completed).

nf-core/modulesnumber 9482

#9482 In nf-core/modules;

· by suhrig was closed on Dec 10, 2025

chore(deps): update quay.io/biocontainers/antismash docker tag to v8.0.4

Status: Closed (abandoned).

nf-core/modulesnumber 9481

#9481 In nf-core/modules;

· by renovate was closed on Dec 1, 2025

chore(deps): update pre-commit hook astral-sh/ruff-pre-commit to v0.14.7

Status: Merged (completed).

nf-core/modulesnumber 9480

#9480 In nf-core/modules;

· by renovate was closed on Dec 1, 2025

chore(deps): pin quay.io/biocontainers/antismash docker tag to 9977bae

Status: Closed (abandoned).

nf-core/modulesnumber 9479

#9479 In nf-core/modules;

· by renovate was closed on Dec 1, 2025

feat(fastq_qc_trim_filter_setstrandedness): Add RiboDetector as alternative rRNA removal tool

Status: Merged (completed).

nf-core/modulesnumber 9462

#9462 In nf-core/modules;

· by pinin4fjords was closed on Nov 27, 2025

Pin python to 3.11 in metaphlan3 conda environment.yml

Status: Merged (completed).

nf-core/modulesnumber 9448

#9448 In nf-core/modules;

· by nathanweeks was closed on Nov 25, 2025

Sendmail issue when running on AWS batch with S3 as workDir

bugSomething isn't workingSomething isn't working

Status: Open.

#9424 In nf-core/modules;

· SZhengP opened on Nov 18, 2025

update topics structure in meta.yml

Status: Merged (completed).

nf-core/modulesnumber 9412

#9412 In nf-core/modules;

· by mirpedrol was closed on Nov 17, 2025