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A curated list of awesome Claude Skills, resources, and tools for customizing Claude AI workflows

Python 2,692 342 Updated Nov 12, 2025

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

Kotlin 377 79 Updated Oct 15, 2025
Jupyter Notebook 55 9 Updated Nov 1, 2024

📚 Tools and databases for analyzing HLA and VDJ genes.

233 27 Updated Oct 5, 2025

MCB 293S: Resources for the 5-week module in biostatistics.

R 4 8 Updated Mar 20, 2018
Jupyter Notebook 24 8 Updated Aug 21, 2024

Survival analysis in Python

Python 2,516 564 Updated Oct 29, 2024

Multi-Omics Factor Analysis

R 357 61 Updated Jun 29, 2024

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…

R 13 5 Updated Jul 31, 2015

😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎

5 1 Updated Apr 15, 2019

DNA methylation analysis notes from Ming Tang

91 34 Updated Sep 19, 2019

OpenTSLM: Time-Series Language Models for Reasoning over Multivariate Medical Text- and Time-Series Data

Python 1,062 80 Updated Nov 9, 2025

T/B cell receptor sequencing analysis notes

268 40 Updated Dec 1, 2024

A Python package for integrating, processing, and analyzing incomplete multi-modal datasets.

Python 22 2 Updated Nov 12, 2025

resources for learning bioinformatics

1,276 223 Updated Jan 8, 2025

Repository for the ISMB/ECCB workshop "A practical introduction to multi-omics integration and network analysis"

HTML 9 6 Updated Jul 23, 2021

The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/

CSS 101 39 Updated Apr 5, 2022

RNAseq analysis notes from Ming Tang

Python 1,050 320 Updated Nov 15, 2021

ATACseqQC tutorials for BioC 2019 workshop

Dockerfile 19 9 Updated Jul 28, 2020

Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment

TeX 24 4 Updated Jul 2, 2025

Collection of bioinformatics training materials

Python 1,076 192 Updated Oct 26, 2025

This repo contains deep learning(DL) papers reviews, presentations on DL/DS topics, data science learning materials

Python 242 41 Updated Nov 8, 2025
Python 4 1 Updated Feb 14, 2025

An R package for the analysis, meta-analysis and result reporting of RNA-Seq gene expression data - Next Generation!

R 8 Updated Oct 10, 2025

RNA-seq workflow: exploratory analysis and differential expression

TeX 80 40 Updated Nov 14, 2023

Applied Computational Genomics Course at UU: Spring 2020

HTML 1 Updated Apr 5, 2024

A practical guide to modern bioinformatics

Jupyter Notebook 20 3 Updated Sep 21, 2025

Integrated Machine Learning for Multi-omics Classification and Prediction

HTML 25 9 Updated Nov 12, 2025

Machine Learning Toolkit for Multi-omics Cancer Subtype Discovery using Multiple Kernel Learning

Python 4 2 Updated Dec 20, 2015

Physalia course Machine Learning for Multi-Omics Integration

HTML 16 6 Updated Jun 11, 2025
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