submit jobs to slurm with quick-and-dirty python

Annotate models of genetic inheritance patterns in variant files (vcf files)

A nextflow pipeline to run Fluffy

CG's rare disease pipeline in next flow, see the main repo here 👇

Collection of tools that are used in the facilities

nim wrapper for htslib for parsing genomics data files

My experimental tools on top of htslib. NOT OFFICIAL!!!

flatten Variant Call Format(VCF)

High-performance error correction for Illumina resequencing data

RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference transposable elements. Please read the wiki page (link belo…

Gene lists and some elementary tools for handling them.

This repository contains data indexes from NIST's Genome in a Bottle project.

FindTranslocations

Visualization tool for genomic data

Draw CIRCOS plots from WGS MP seq data