State is a machine learning model that predicts cellular perturbation response across diverse contexts

BioNeMo Framework: For building and adapting AI models in drug discovery at scale

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Template repository to build PyTorch projects from source on any version of PyTorch/CUDA/cuDNN.

Conda recipes for the bioconda channel.

Crawl a site to generate knowledge files to create your own custom GPT from a URL

Human Pangenome Reference Consortium - HG002 Data Freeze (v1.0)

A General-purpose Parallel and Heterogeneous Task Programming System

Interact with your documents using the power of GPT, 100% privately, no data leaks

Dump all your files and thoughts into your GenerativeAI Second Brain and chat with it

My personal webpage

Avogadro libraries provide 3D rendering, visualization, analysis and data processing useful in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

gpt4all: a chatbot trained on a massive collection of clean assistant data including code, stories and dialogue

Port of OpenAI's Whisper model in C/C++

基于向量数据库与GPT3.5的通用本地知识库方案(A universal local knowledge base solution based on vector database and GPT3.5)

Solve puzzles. Improve your pytorch.

A curated list of nextflow based pipelines

DRAGEN open-source mapper

Workflow for germline short variant discovery using GATK4

🔬 Path to a free self-taught education in Bioinformatics!

Customizable workflows based on snakemake and python for the analysis of NGS data

Magnum-NLC2CMD is the winning solution for the NeurIPS 2020 NLC2CMD challenge.

The fastai book, published as Jupyter Notebooks

Settings for various tools I use.

The ultimate Vim configuration (vimrc)

This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used RNA-seq pipelines"